@pipeworx/uniprot

Connect: https://gateway.pipeworx.io/uniprot/mcp · Install: one-click buttons

Tools: 6

UniProt MCP — the canonical protein-sequence and -function knowledge-base from EBI. Keyless.

Tools

  • search(query, format?, size?) — UniProtKB search (Lucene-style query)
  • get(accession, format?) — single entry by accession (e.g. P12345)
  • proteomes_search(query, size?) — search proteomes
  • taxonomy_search(query, size?) — search NCBI taxonomy as exposed by UniProt
  • keyword(keyword_id) — UniProt keyword info
  • feature_summary(accession) — summary of feature annotations (domain, mutagen, etc)

Data source

https://rest.uniprot.org/ — public, no API key.

Tools

  • search — UniProtKB search (Lucene-style: “gene:BRCA1 AND organism_id:9606”).
  • get — Single UniProtKB entry by accession.
  • proteomes_search — Search reference proteomes.
  • taxonomy_search — Search NCBI taxonomy via UniProt.
  • keyword — UniProt keyword info (KW-####).
  • feature_summary — Feature annotation summary (DOMAIN, MUTAGEN, etc.) for an accession.

Tools

  • feature_summary — Feature annotation summary (DOMAIN, MUTAGEN, etc.) for an accession.
  • get — Single UniProtKB entry by accession.
  • keyword — UniProt keyword info (KW-####).
  • proteomes_search — Search reference proteomes.
  • search — UniProtKB search (Lucene-style: gene:BRCA1 AND organism_id:9606 ).
  • taxonomy_search — Search NCBI taxonomy via UniProt.

Regenerated from source · build May 21, 2026